Results 1-10 of about 359
  1. Rigor and Reproducibility of Spatial Transcriptomics Performed on Clinically Sourced Human Tissues. new window
    Date: 2025-04-29
    Authors: Smith KD, MacDonald JW, Li X, Beirne E, Stewart G, Bammler TK, Akilesh S.
    Journal: Laboratory investigation; a journal of technical methods and pathology
    https://doi.org/10.1016/j.labinv.2025.104190 - Europe PMC
  2. Human Skeletal Muscle Niche Formation and Analysis with Spatial RNA Sequencing new window
    Formation of the human skeletal muscle can be achieved through xenotransplant of human stem or progenitor cells into mice. Human cells, such as those derived from human pluripotent stem cells (hPSCs), are dissociated from in vitro culture conditions
    Date: (2025)
    Authors: Ben Clock , Michael Hicks
    https://experiments.springernature.com/.../10.1007/7651_2025_619 - SpringerNature
  3. Protocol for preparing fresh frozen soybean tissues for spatial transcriptomics. new window
    Date: 2025-04-23
    Authors: Luo Z, Schmitz RJ.
    Journal: STAR protocols
    https://doi.org/10.1016/j.xpro.2025.103790 - Europe PMC
  4. Integrating Tissue Microarray to GeoMx® Digital Spatial Profiler : SpatialTranscriptomics Assay with Bioinformatics Anal... new window
    Genome-wide or high-plex gene expression is important to understand the organism, tissue, and cellular mechanism. From microarrays to next-generation sequencing (RNA-Seq) at the bulk level and then to the single cell level, gene expression studies
    Date: (2025)
    Authors: Deshica Dechamma , Manju Moorthy , Vijayalakshmi Bhat , Gopalakrishna Ramaswamy
    Ref: Gene Expression Analysis
    https://experiments.springernature.com/.../978-1-0716-4276-4_9 - SpringerNature
  5. Single-Cell and Spatial Transcriptomic Analysis of Maize Embryo Development. new window
    Date: 2025-04-23
    Authors: Wu H, Scanlon MJ.
    Journal: Cold Spring Harbor protocols
    https://doi.org/10.1101/pdb.top108468 - Europe PMC
  6. Homebuilt Imaging-Based SpatialTranscriptomics: Tertiary Lymphoid Structures as a Case Example new window
    Spatialtranscriptomics methods provide insight into the cellular heterogeneity and spatial architecture of complex, multicellular systems. Combining molecular and spatial information provides important clues to study tissue architecture
    Date: (2025)
    Authors: Thomas Defard , Auxence Desrentes , Charles Fouillade , Florian Mueller
    Ref: Tertiary Lymphoid Structures
    https://experiments.springernature.com/.../978-1-0716-4184-2_5 - SpringerNature
  7. Marrying mechanics with spatialtranscriptomics new window
    A method infers tension from spatial transcriptomic data on single cells in tissue context.
    Date: (2025)
    Authors: Alexandre Francou , Woonyung Hur , Anna-Katerina Hadjantonakis
    https://www.nature.com/articles/s41592-024-02491-4 - SpringerNature
  8. Protocol for single-cell RNA sequencing and spatial transcriptomics of bladder Ewing sarcoma. new window
    Date: 2025-03-10
    Authors: Mao W, Zhang H, Ji J, Wu J, Chen M, Sun C.
    Journal: STAR protocols
    https://doi.org/10.1016/j.xpro.2025.103687 - Europe PMC
  9. A computational pipeline for spatial mechano-transcriptomics new window
    Advances in spatial profiling technologies are providing insights into how molecular programs are influenced by local signaling and environmental cues. However, cell fate specification and tissue patterning involve the interplay of biochemical and
    Date: (2025)
    Authors: Adrien Hallou , Ruiyang He , Benjamin D. Simons , Bianca Dumitrascu
    https://experiments.springernature.com/.../s41592-025-02618-1 - SpringerNature
  10. OmniClust: A versatile clustering toolkit for single-cell and spatial transcriptomics data. new window
    Date: 2025-03-06
    Authors: Cui Y, Cui Y, Ding Y, Nakai K, Wei L, Le Y, Ye X, Sakurai T.
    Journal: Methods (San Diego, Calif.)
    https://doi.org/10.1016/j.ymeth.2025.03.007 - Europe PMC
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