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  1. EpicPred: predicting phenotypes driven by epitope-binding TCRs using attention-based multiple instance learning.
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    Journal: Bioinformatics. 2025 Mar 04;41(3)
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  2. Disease diagnostics using machine learning of B cell and T cell receptor sequences.
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    Journal: Science. 2025 Feb 21;387(6736)
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  3. An effective COVID-19 classification in X-ray images using a new deep learning framework.
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    Journal: J Xray Sci Technol. 2025 Mar;33(2)
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  4. A machine learning-based analysis for the effectiveness of online teaching and learning in Pakistan during COVID-19 lockdown.
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    Journal: Work. 2025 May;81(1)
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  5. Effect of the Reassured Self-Compassion-Based School Program on Anxiety, Video Game Addiction, and Body Image Among Rural Female Adolescents: Retrospective Study.
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    Journal: JMIR Form Res. 2025 Feb 19;9
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  6. Using minor variant genomes and machine learning to study the genome biology of SARS-CoV-2 over time.
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    Journal: Nucleic Acids Res. 2025 Feb 08;53(4)
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  7. RAG_MCNNIL6: A Retrieval-Augmented Multi-Window Convolutional Network for Accurate Prediction of IL-6 Inducing Epitopes.
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    Journal: J Chem Inf Model. 2025 Mar 10;65(5)
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  8. Integrating state-space modeling, parameter estimation, deep learning, and docking techniques in drug repurposing: a case study on COVID-19 cytokine storm.
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    Journal: J Am Med Inform Assoc. 2026 Jan 01;33(1)
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  9. Identification of biomarkers in Alzheimer's disease and COVID-19 by bioinformatics combining single-cell data analysis and machine learning algorithms.
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    Journal: PLoS One. 2025;20(2)
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  10. Using Machine Learning and Optical Microscopy Image Analysis of Immunosensors Made on Plasmonic Substrates: Application to Detect the SARS-CoV-2 Virus.
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    Journal: ACS Sens. 2025 Feb 28;10(2)
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