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Databases/Tools
NAR database/Web Server and OBRC
Heatmapper2: web-enabled heat mapping made easy.
Nucleic Acids Res. 2025 Jul 07;53(W1)
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Arena3Dweb: interactive 3D visualization of multilayered networks.
Nucleic Acids Res. 2021 Jul 02;49(W1)
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PCAT: an integrated portal for genomic and preclinical testing data of pediatric cancer patient-derived xenograft models.
Nucleic Acids Res. 2021 Jan 08;49(D1)
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ReMap 2020: a database of regulatory regions from an integrative analysis of Human and Arabidopsis DNA-binding sequencing experiments.
Nucleic Acids Res. 2020 Jan 08;48(D1)
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LOLAweb: a containerized web server for interactive genomic locus overlap enrichment analysis.
Nucleic Acids Res. 2018 Jul 02;46(W1)
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PlotTwist: A web app for plotting and annotating continuous data.
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PLoS Biol. 2020 Jan;18(1)
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Rchimerism: An R Package for Automated Chimerism Data Analysis.
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J Mol Diagn. 2020 Jan;22(1)
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Regeneration Rosetta: An Interactive Web Application To Explore Regeneration-Associated Gene Expression and Chromatin Accessibility.
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G3 (Bethesda). 2019 Dec 03;9(12)
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Standardised mortality ratios as a user-friendly performance metric and trigger for quality improvement in a Flemish hospital network: multicentre retrospective study.
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BMJ Open. 2019 Sep 08;9(9)
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MetaInsight: An interactive web-based tool for analyzing, interrogating, and visualizing network meta-analyses using
R-shiny
and netmeta.
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Res Synth Methods. 2019 Dec;10(4)
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MIND: A Double-Linear Model To Accurately Determine Monoisotopic Precursor Mass in High-Resolution Top-Down Proteomics.
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Anal Chem. 2019 Aug 06;91(15)
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PatientExploreR: an extensible application for dynamic visualization of patient clinical history from electronic health records in the OMOP common data model.
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Bioinformatics. 2019 Nov 01;35(21)
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Testing two variances for superiority/non-inferiority and equivalence: Using the exhaustion algorithm for sample size allocation with cost.
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Br J Math Stat Psychol. 2020 May;73(2)
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RiboStreamR: a web application for quality control, analysis, and visualization of Ribo-seq data.
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BMC Genomics. 2019 Jun 06;20(Suppl 5)
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GScluster: network-weighted gene-set clustering analysis.
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BMC Genomics. 2019 May 09;20(1)
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