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  • Databases/Tools

NAR database/Web Server and OBRC

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  1. Multivariate pattern analysis: a method and software to reveal, quantify, and visualize predictive association patterns in multicollinear data.
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    Journal: BMC Bioinformatics. 2024 Jan 31;25(1)
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  2. GatekeepR: an R Shiny application for the identification of nodes with high dynamic impact in Boolean networks.
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    Journal: Bioinformatics. 2024 Jan 02;40(1)
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  3. PlantC2U: deep learning of cross-species sequence landscapes predicts plastid C-to-U RNA editing in plants.
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    Journal: J Exp Bot. 2024 Apr 15;75(8)
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  4. OssaNMA: An R package for using information from network meta-analyses to optimize the power and sample allocation of a new two-arm trial.
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    Journal: PLoS One. 2023;18(12)
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  5. ChatDashboard: A Framework to collect, link, and process donated WhatsApp Chat Log Data.
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    Journal: Behav Res Methods. 2024 Apr;56(4)
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  6. An interactive tool for designing efficient toxicology experiments.
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    Journal: Arch Toxicol. 2024 Mar;98(3)
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  7. Improving pharmacometrics analysis efficiency using DataCheQC: An interactive, Shiny-based app for quality control of pharmacometrics datasets.
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    Journal: CPT Pharmacometrics Syst Pharmacol. 2023 Oct;12(10)
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  8. cyjShiny: A cytoscape.js R Shiny Widget for network visualization and analysis.
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    Journal: PLoS One. 2023;18(8)
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  9. NanopoReaTA: a user-friendly tool for nanopore-seq real-time transcriptional analysis.
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    Journal: Bioinformatics. 2023 Aug 01;39(8)
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  10. ShinyBioHEAT: an interactive shiny app to identify phenotype driver genes in E.coli and B.subtilis.
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    Journal: Bioinformatics. 2023 Aug 01;39(8)
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