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  1. Using minor variant genomes and machine learning to study the genome biology of SARS-CoV-2 over time.
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    Journal: Nucleic Acids Res. 2025 Feb 08;53(4)
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  2. RAG_MCNNIL6: A Retrieval-Augmented Multi-Window Convolutional Network for Accurate Prediction of IL-6 Inducing Epitopes.
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    Journal: J Chem Inf Model. 2025 Mar 10;65(5)
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  3. Identification of biomarkers in Alzheimer's disease and COVID-19 by bioinformatics combining single-cell data analysis and machine learning algorithms.
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    Journal: PLoS One. 2025;20(2)
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  4. Using Machine Learning and Optical Microscopy Image Analysis of Immunosensors Made on Plasmonic Substrates: Application to Detect the SARS-CoV-2 Virus.
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    Journal: ACS Sens. 2025 Feb 28;10(2)
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  5. RNA-protein interaction prediction using network-guided deep learning.
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    Journal: Commun Biol. 2025 Feb 16;8(1)
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  6. Using a multi-strain infectious disease model with physical information neural networks to study the time dependence of SARS-CoV-2 variants of concern.
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    Journal: PLoS Comput Biol. 2025 Feb;21(2)
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  7. Unraveling microglial spatial organization in the developing human brain with DeepCellMap, a deep learning approach coupled with spatial statistics.
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    Journal: Nat Commun. 2025 Feb 13;16(1)
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  8. EAMAPG: Explainable Adversarial Model Analysis via Projected Gradient Descent.
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    Journal: Comput Biol Med. 2025 Apr;188
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  9. Understanding the Engagement and Interaction of Superusers and Regular Users in UK Respiratory Online Health Communities: Deep Learning-Based Sentiment Analysis.
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    Journal: J Med Internet Res. 2025 Feb 13;27
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  10. Reliability-enhanced data cleaning in biomedical machine learning using inductive conformal prediction.
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    Journal: PLoS Comput Biol. 2025 Feb;21(2)
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