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  • Databases/Tools

NAR database/Web Server and OBRC

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  1. Datavzrd: Rapid programming- and maintenance-free interactive visualization and communication of tabular data.
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    Journal: PLoS One. 2025;20(7)
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  2. shinyDSP: a Shiny application for interactive analysis and visualization of NanoString GeoMx Whole Transcriptome Atlas data.
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    Journal: Bioinformatics. 2025 Jul 01;41(7)
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  3. BIGapp: A user-friendly genomic tool kit identified quantitative trait loci for creeping rootedness in alfalfa (Medicago sativa L.).
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    Journal: Plant Genome. 2025 Sep;18(3)
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  4. ShinySC: An R/Shiny-based desktop application for seamless analysis of scRNA-Seq data.
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    Journal: Biomed J. 2026 Feb;49(1)
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  5. Pathway Volcano: an interactive tool for pathway guided visualization of differential expression data.
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    Journal: Bioinformatics. 2025 Jul 01;41(7)
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  6. EDAmame: interactive exploratory data analyses with explainable models.
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    Journal: Bioinformatics. 2025 Jun 02;41(6)
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  7. ShiNyP: Unlocking SNP-Based Population Genetics-AI-Assisted Platform for Rapid and Interactive Visual Exploration.
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    Journal: Mol Biol Evol. 2025 Jun 04;42(6)
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  8. A Customizable Data Quality Tool for Global Observational Research Networks.
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    Journal: Stud Health Technol Inform. 2025 May 15;327
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  9. R/Shiny Application: Transfer Office Monitoring and Data Quality Assessment.
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    Journal: Stud Health Technol Inform. 2025 May 15;327
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  10. Machine learning based prediction by PlantCdMiner and experimental validation of cadmium-responsive genes in plants.
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    Journal: J Hazard Mater. 2025 Aug 15;494
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