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  1. OPUS-Rota3: Improving Protein Side-Chain Modeling by Deep Neural Networks and Ensemble Methods.
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    Journal: J Chem Inf Model. 2020 Dec 28;60(12)
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  2. ISSEC: inferring contacts among protein secondary structure elements using deep object detection.
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    Journal: BMC Bioinformatics. 2020 Nov 05;21(1)
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  3. RNANet: an automatically built dual-source dataset integrating homologous sequences and RNA structures.
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    Journal: Bioinformatics. 2021 Jun 09;37(9)
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  4. Assessing multiple score functions in Rosetta for drug discovery.
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    Journal: PLoS One. 2020;15(10)
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  5. Fold recognition by scoring protein maps using the congruence coefficient.
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    Journal: Bioinformatics. 2021 May 01;37(4)
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  6. ProtFold-DFG: protein fold recognition by combining Directed Fusion Graph and PageRank algorithm.
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    Journal: Brief Bioinform. 2021 May 20;22(3)
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  7. A novel alignment-free DNA sequence similarity analysis approach based on top-k n-gram match-up.
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    Journal: J Mol Graph Model. 2020 Nov;100
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  8. Predicting Local Protein 3D Structures Using Clustering Deep Recurrent Neural Network.
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    Journal: IEEE/ACM Trans Comput Biol Bioinform. 2022;19(1)
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  9. De novo Protein Structure Prediction by Coupling Contact With Distance Profile.
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    Journal: IEEE/ACM Trans Comput Biol Bioinform. 2022;19(1)
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  10. Using physical features of protein core packing to distinguish real proteins from decoys.
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    Journal: Protein Sci. 2020 Sep;29(9)
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