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  1. When the lowest energy does not induce native structures: parallel minimization of multi-energy values by hybridizing searching intelligences.
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    Journal: PLoS One. 2012;7(9)
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  2. Creating supersecondary structures with BuildBeta.
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    Journal: Methods Mol Biol. 2013;932
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  3. A survey of machine learning methods for secondary and supersecondary protein structure prediction.
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    Journal: Methods Mol Biol. 2013;932
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  4. Deep architectures for protein contact map prediction.
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    Journal: Bioinformatics. 2012 Oct 01;28(19)
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  5. A probabilistic fragment-based protein structure prediction algorithm.
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    Journal: PLoS One. 2012;7(7)
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  6. LXtoo: an integrated live Linux distribution for the bioinformatics community.
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    Journal: BMC Res Notes. 2012 Jul 19;5
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  7. An improved genetic algorithm for statistical potential function design and protein structure prediction.
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    Journal: Int J Data Min Bioinform. 2012;6(2)
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  8. Accelerated protein structure comparison using TM-score-GPU.
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    Journal: Bioinformatics. 2012 Aug 15;28(16)
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  9. CMWeb: an interactive on-line tool for analysing residue-residue contacts and contact prediction methods.
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    Journal: Nucleic Acids Res. 2012 Jul;40(Web Server issue)
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  10. FunFOLDQA: a quality assessment tool for protein-ligand binding site residue predictions.
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    Journal: PLoS One. 2012;7(5)
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