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  • Databases/Tools

NAR database/Web Server and OBRC

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  1. EM-fold: De novo folding of alpha-helical proteins guided by intermediate-resolution electron microscopy density maps.
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    Journal: Structure. 2009 Jul 15;17(7)
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  2. Improved prediction of protein side-chain conformations with SCWRL4.
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    Journal: Proteins. 2009 Dec;77(4)
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  3. Dynamic programming algorithms and grammatical modeling for protein beta-sheet prediction.
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    Journal: J Comput Biol. 2009 Jul;16(7)
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  4. Prediction of beta-turn in protein using E-SSpred and support vector machine.
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    Journal: Protein J. 2009 May;28(3-4)
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  5. SAM-T08, HMM-based protein structure prediction.
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    Journal: Nucleic Acids Res. 2009 Jul;37(Web Server issue)
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  6. Pokefind: a novel topological filter for use with protein structure prediction.
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    Journal: Bioinformatics. 2009 Jun 15;25(12)
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  7. COMPASS server for homology detection: improved statistical accuracy, speed and functionality.
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    Journal: Nucleic Acids Res. 2009 Jul;37(Web Server issue)
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  8. QMEAN server for protein model quality estimation.
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    Journal: Nucleic Acids Res. 2009 Jul;37(Web Server issue)
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  9. NNcon: improved protein contact map prediction using 2D-recursive neural networks.
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    Journal: Nucleic Acids Res. 2009 Jul;37(Web Server issue)
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  10. A minima hopping study of all-atom protein folding and structure prediction.
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    Journal: J Phys Chem B. 2009 May 21;113(20)
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