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  • Databases/Tools

NAR database/Web Server and OBRC

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  1. Improving protein structure prediction with extended sequence similarity searches and deep-learning-based refinement in CASP15.
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    Journal: Proteins. 2023 Dec;91(12)
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  2. Pairwise and Multi-chain Protein Docking Enhanced Using LZerD Web Server.
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    Journal: Methods Mol Biol. 2023;2690
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  3. AlphaFold and the future of structural biology.
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    Journal: Acta Crystallogr D Struct Biol. 2023 Jul 01;79(Pt 7)
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  4. xProtCAS: A Toolkit for Extracting Conserved Accessible Surfaces from Protein Structures.
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    Journal: Biomolecules. 2023 May 30;13(6)
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  5. AlphaFold and the future of structural biology.
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    Journal: IUCrJ. 2023 Jul 01;10(Pt 4)
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  6. Combining pairwise structural similarity and deep learning interface contact prediction to estimate protein complex model accuracy in CASP15.
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    Journal: Proteins. 2023 Dec;91(12)
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  7. iQDeep: an integrated web server for protein scoring using multiscale deep learning models.
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    Journal: J Mol Biol. 2023 Jul 15;435(14)
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  8. GraphGPSM: a global scoring model for protein structure using graph neural networks.
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    Journal: Brief Bioinform. 2023 Jul 20;24(4)
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  9. Estimation of model accuracy in CASP15 using the ModFOLDdock server.
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    Journal: Proteins. 2023 Dec;91(12)
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  10. An end-to-end deep learning method for protein side-chain packing and inverse folding.
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    Journal: Proc Natl Acad Sci U S A. 2023 Jun 06;120(23)
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