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  • Databases/Tools

NAR database/Web Server and OBRC

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  1. Accurate prediction of inter-protein residue-residue contacts for homo-oligomeric protein complexes.
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    Journal: Brief Bioinform. 2021 Sep 02;22(5)
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  2. diSBPred: A machine learning based approach for disulfide bond prediction.
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    Journal: Comput Biol Chem. 2021 Apr;91
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  3. Combination of deep neural network with attention mechanism enhances the explainability of protein contact prediction.
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    Journal: Proteins. 2021 Jun;89(6)
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  4. DeepDist: real-value inter-residue distance prediction with deep residual convolutional network.
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    Journal: BMC Bioinformatics. 2021 Jan 25;22(1)
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  5. TopSuite Web Server: A Meta-Suite for Deep-Learning-Based Protein Structure and Quality Prediction.
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    Journal: J Chem Inf Model. 2021 Feb 22;61(2)
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  6. Protein structure search to support the development of protein structure prediction methods.
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    Journal: Proteins. 2021 Jun;89(6)
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  7. SPServer: split-statistical potentials for the analysis of protein structures and protein-protein interactions.
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    Journal: BMC Bioinformatics. 2021 Jan 06;22(1)
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  8. Improved Protein Decoy Selection via Non-Negative Matrix Factorization.
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    Journal: IEEE/ACM Trans Comput Biol Bioinform. 2022;19(3)
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  9. Template-based prediction of protein structure with deep learning.
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    Journal: BMC Genomics. 2020 Dec 29;21(Suppl 11)
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  10. PolyFold: An interactive visual simulator for distance-based protein folding.
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    Journal: PLoS One. 2020;15(12)
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