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  • Databases/Tools

NAR database/Web Server and OBRC

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  1. PepCrawler: a fast RRT-based algorithm for high-resolution refinement and binding affinity estimation of peptide inhibitors.
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    Journal: Bioinformatics. 2011 Oct 15;27(20)
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  2. Real-time PyMOL visualization for Rosetta and PyRosetta.
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    Journal: PLoS One. 2011;6(8)
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  3. Modeling disordered regions in proteins using Rosetta.
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    Journal: PLoS One. 2011;6(7)
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  4. Improving protein structure prediction using multiple sequence-based contact predictions.
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    Journal: Structure. 2011 Aug 10;19(8)
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  5. A sampling-based method for ranking protein structural models by integrating multiple scores and features.
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    Journal: Curr Protein Pept Sci. 2011 Sep;12(6)
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  6. SOMRuler: a novel interpretable transmembrane helices predictor.
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    Journal: IEEE Trans Nanobioscience. 2011 Jun;10(2)
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  7. firestar--advances in the prediction of functionally important residues.
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    Journal: Nucleic Acids Res. 2011 Jul;39(Web Server issue)
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  8. PSP_MCSVM: brainstorming consensus prediction of protein secondary structures using two-stage multiclass support vector machines.
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    Journal: J Mol Model. 2011 Sep;17(9)
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  9. APOLLO: a quality assessment service for single and multiple protein models.
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    Journal: Bioinformatics. 2011 Jun 15;27(12)
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  10. A library of protein surface patches discriminates between native structures and decoys generated by structure prediction servers.
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    Journal: BMC Struct Biol. 2011 May 04;11(1)
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