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  • Databases/Tools

NAR database/Web Server and OBRC

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  1. From Numbers to Insights: Developing a Visual Cohort Explorer for Feasibility Requests.
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    Journal: Stud Health Technol Inform. 2025 Sep 03;331
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  2. surveydown: An open-source, markdown-based platform for programmable and reproducible surveys.
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    Journal: PLoS One. 2025;20(8)
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  3. Screening, Validation, and Machine Learning-Based Evaluation of Serum Protein Biomarkers for Esophageal Squamous Cell Carcinoma Based on Single-Cell Subtype-Specific Genes.
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    Journal: J Proteome Res. 2025 Sep 05;24(9)
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  4. StatModPredict: A user-friendly R-Shiny interface for fitting and forecasting with statistical models.
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    Journal: PLoS One. 2025;20(8)
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  5. mzQuality: An Open-Source Software Tool for Quality Monitoring and Reporting of Targeted Mass Spectrometry Measurements.
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    Journal: J Am Soc Mass Spectrom. 2025 Aug 06;36(8)
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  6. Datavzrd: Rapid programming- and maintenance-free interactive visualization and communication of tabular data.
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    Journal: PLoS One. 2025;20(7)
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  7. shinyDSP: a Shiny application for interactive analysis and visualization of NanoString GeoMx Whole Transcriptome Atlas data.
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    Journal: Bioinformatics. 2025 Jul 01;41(7)
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  8. BIGapp: A user-friendly genomic tool kit identified quantitative trait loci for creeping rootedness in alfalfa (Medicago sativa L.).
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    Journal: Plant Genome. 2025 Sep;18(3)
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  9. Pathway Volcano: an interactive tool for pathway guided visualization of differential expression data.
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    Journal: Bioinformatics. 2025 Jul 01;41(7)
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  10. EDAmame: interactive exploratory data analyses with explainable models.
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    Journal: Bioinformatics. 2025 Jun 02;41(6)
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