Results 551-560 of about 900
Date: 2020-08-06 Authors: Waddell AR, Liao D. Journal: Journal of visualized experiments : JoVE - Epigenetic regulation plays a critical role in gene expression, cellular differentiation, and disease. There is a complex interplay between the different layers of epigenetic information, including DNA methylation, nucleosome positions, histone
Date: (2018) Authors: Clare Stirzaker , Jenny Z. Song , Aaron L. Statham , Susan J. Clark Ref: DNA Methylation Protocols - Using Chromatin Accessibility to Delineate Therapeutic Subtypes in Pancreatic Cancer Patient-Derived Cell Lines. new window
Date: 2020-08-04 Authors: Brunton H, Garner IM, Bailey UM, Upstill-Goddard R, Bailey PJ. Journal: STAR protocols - Chromatinimmunoprecipitation followed by high-throughput sequencing (ChIP-seq) is currently the method of choice to determine binding sites of chromatin-associated factors in a genome-wide manner. Here, we describe a method to investigate t
Date: (2018) Authors: Massimiliano Manzo , Christina Ambrosi , Tuncay Baubec Ref: CpG Islands Date: 2020-08-03 Authors: DeCaprio J, Kohl TO. Journal: Cold Spring Harbor protocols - Chromatin is a dynamic macromolecular structure comprised of histones and a wealth of non-histone proteins. Recently, it has become clear that RNA is also an integral component of chromatin playing an important role in regulating its structure and
Date: (2018) Authors: Tatiana A. Soboleva , David J. Tremethick Ref: Histone Variants - Tissue-Specific <i>In Vivo</i> Biotin Chromatin Immunoprecipitation with Sequencing in Zebrafish and Chicken. new window
Date: 2020-07-31 Authors: Lukoseviciute M, Ling ITC, Senanayake U, Candido-Ferreira I, Taylor G, Williams RM, Sauka-Spengler T. Journal: STAR protocols - To the Editor: Mumbach et al. recently described HiChIP, a novel protein-mediated chromatin-conformation assay that lowers cellular input requirements while simultaneously increasing the yield of informative reads compared to previous methods1. We
Date: (2018) Authors: Caleb A Lareau , Martin J Aryee - Assessing relationships between chromatin interactions and regulatory genomic activities using the self-organizing map. new window
Date: 2020-07-09 Authors: Kunz T, Rieber L, Mahony S. Journal: Methods (San Diego, Calif.) - Comprehensive mapping of protein–DNA interactions is essential to uncover the mechanisms involved in gene regulation. However, the data generated has been sparse given the number of regulatory elements and transcription factors (TFs) encoded in the
Date: (2018) Authors: Jared A. Sewell , Juan I. Fuxman Bass Ref: Two-Hybrid Systems