Results 271-280 of about 900
- DNA methylation is thought to regulate accessibility of chromatin and binding of regulatory elements; however, it is difficult to determine if chromatin accessibility or transcription factor (TF) binding overlap with methylated or unmethylated DNA if
Date: (2021) Authors: Priscillia Lhoumaud , Jane Skok Ref: Enhancers and Promoters - Global Level Quantification of Histone Post-Translational Modifications in a 3D Cell Culture Model of Hepatic Tissue. new window
Date: 2022-05-05 Authors: Joseph-Chowdhury JN, Stransky S, Graff S, Cutler R, Young D, Kim JS, Madrid-Aliste C, Aguilan JT, Nieves E, Sun Y, Yoo EJ, Sidoli S. Journal: Journal of visualized experiments : JoVE - Arabidopsis thaliana Mature Endosperm Dissection and Isolation of Genomic DNA from Mature Seed Tissues new windowWe describe methods to separate endosperms and embryos from Arabidopsis thaliana mature seeds in large amounts and to isolate high-quality genomic DNA from those tissues. The resulting materials are suitable for analysis of DNA methylation by
Date: (2021) Authors: Mayumi Iwasaki , Luis Lopez-Molina Ref: Plant Transposable Elements - Analysis of the Role and Mechanism of ZEB1 in Regulating Cervical Carcinoma Progression via Modulating PD-1/PD-L1 Checkp... new window
Date: 2022-04-30 Authors: Lin Y, Wang X. Journal: Computational and mathematical methods in medicine - Chromatin accessibility, or the physical access to chromatinized DNA, is a widely studied characteristic of the eukaryotic genome. As active regulatory DNA elements are generally ‘accessible’, the genome-wide profiling of chromatin accessibility can
Date: (2021) Authors: Liesbeth Minnoye , Georgi K. Marinov , Thomas Krausgruber , Lixia Pan ... Stein Aerts - An Efficient Chromatin Immunoprecipitation Protocol for the Analysis of Histone Modification Distributions in the Brown ... new window
Date: 2022-04-25 Authors: Bourdareau S, Godfroy O, Gueno J, Scornet D, Coelho SM, Tirichine L, Cock JM. Journal: Methods and protocols - Chromosome conformation capture and its variants have allowed chromatin topology to be interrogated at a superior resolution and throughput than by microscopic methods. Among the method derivatives, 4C-seq (circular chromosome conformation capture,
Date: (2021) Authors: Nezih Karasu , Tom Sexton Ref: Capturing Chromosome Conformation Date: 2022-04-21 Authors: Jing F, Zhang SW, Zhang S. Journal: Methods (San Diego, Calif.) - Current proteomic approaches disassemble and digest nucleosome particles, blurring readouts of the ‘histone code’. To preserve nucleosome-level information, we developed Nuc-MS, which displays the landscape of histone variants and their
Date: (2021) Authors: Luis F. Schachner , Kevin Jooß , Marc A. Morgan , Andrea Piunti ... Neil L. Kelleher - An optimized 4C-seq protocol based on cistrome and epigenome data in the mouse RAW264.7 macrophage cell line. new window
Date: 2022-04-19 Authors: Huang Z, Wang C, Treuter E, Fan R. Journal: STAR protocols