Results 111-120 of about 900
- Efficient Genome-Wide Chromatin Profiling by CUT&RUN with Low Numbers of Muscle Stem Cells new windowAdult muscle stem cells (MuSCs), also called satellite cells, are situated under the basal lamina of myofibers in skeletal muscles. MuSCs are instrumental for postnatal muscle growth and regeneration of skeletal muscles. Under physiological
Date: (2023) Authors: Dong Ding , Thomas Braun Ref: Skeletal Muscle Stem Cells Date: 2024-01-01 Authors: Becker NA, Peters JP, James Maher L. Journal: Methods in molecular biology (Clifton, N.J.) - The ChIP-Exo Method to Identify Genomic Locations of DNA-Binding Proteins at Near Single Base-Pair Resolution new windowChromatinimmunoprecipitation (ChIP) is a technique to determine whether a protein interacts with a specific DNA sequence. ChIP-sequencing (ChIP-seq) is one of the most widely used methods to identify genome-wide DNA-binding sites of nucle
Date: (2023) Authors: Ssu-Yu Yeh , Ho Sung Rhee Ref: DNA-Protein Interactions - Different from the canonical right-handed B-DNA, a left-handed Z-DNA forms an alternating syn- and anti-base conformations along the double-stranded helix under physiological conditions. Z-DNA structure plays a role in transcriptional regulation,
Date: (2023) Authors: Tae-Young Roh Ref: Z-DNA Date: 2024-01-01 Authors: Chumsakul O, Nakamura K, Fukamachi K, Ishikawa S, Oshima T. Journal: Methods in molecular biology (Clifton, N.J.) - Posttranslational modifications of histone are intimately related to chromatin/chromosome-mediated cellular eventsChromatin/chromosome-mediated cellular events. Among all, the roles of histone modifications including acetylation, methylation,
Date: (2023) Authors: Naoko Yoshizawa-Sugata , Hisao Masai Ref: Chromosome Analysis - Analysis of Chromatin Accessibility, Histone Modifications, and Transcriptional States in Specific Cell Types Using Flow... new windowThe past two decades in biomedical research have experienced an explosion of cell type-specific and single-cell studies, especially concerning the concomitant dissection of regulatory and transcriptional landscapes of those under investigation.
Date: (2023) Authors: Kenneth W. Berendzen , Christopher Grefen , Takuya Sakamoto , Daniel Slane Ref: Plant Gene Regulatory Networks Date: 2024-01-01 Authors: Hicks SL, Scharer CD. Journal: Methods in molecular biology (Clifton, N.J.) - The base excision repair (BER) is the primary damage repair pathway for repairing most of the endogenous DNA damage including oxidative base lesions, apurinic/apyrimidinic (AP) sites, and single-strand breaks (SSBs) in the genome. Repair of these
Date: (2023) Authors: Mason Tarpley , Yingling Chen , Kishor K. Bhakat Ref: Base Excision Repair Pathway - A DNA Pull-Down Assay with Diversity Forms of Competitor for Detecting or Evaluating Protein–DNA Interactions new windowDNA–protein interactions (DPIs) are critical to all living organisms, particularly in the regulation of gene expression, replication, packing, recombination, and DNA repair, as well as RNA transport and translation. Many laboratory techniques have
Date: (2023) Authors: Hongyan Sui , Tomozumi Imamichi Ref: DNA-Protein Interactions