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  • Databases/Tools

NAR database/Web Server and OBRC

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  1. Methylscaper: an R/Shiny app for joint visualization of DNA methylation and nucleosome occupancy in single-molecule and single-cell data.
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    Journal: Bioinformatics. 2021 Dec 11;37(24)
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  2. Correlation AnalyzeR: functional predictions from gene co-expression correlations.
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    Journal: BMC Bioinformatics. 2021 Apr 20;22(1)
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  3. animalcules: interactive microbiome analytics and visualization in R.
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    Journal: Microbiome. 2021 Mar 28;9(1)
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  4. WASP: a versatile, web-accessible single cell RNA-Seq processing platform.
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    Journal: BMC Genomics. 2021 Mar 18;22(1)
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  5. EigenGWAS: An online visualizing and interactive application for detecting genomic signatures of natural selection.
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    Journal: Mol Ecol Resour. 2021 Jul;21(5)
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  6. A Synergetic R-Shiny Portal for Modeling and Tracking of COVID-19 Data.
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    Journal: Front Public Health. 2020;8
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  7. MegaR: an interactive R package for rapid sample classification and phenotype prediction using metagenome profiles and machine learning.
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    Journal: BMC Bioinformatics. 2021 Jan 18;22(1)
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  8. BOIN Suite: A Software Platform to Design and Implement Novel Early-Phase Clinical Trials.
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    Journal: JCO Clin Cancer Inform. 2021 Jan;5
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  9. MiBiOmics: an interactive web application for multi-omics data exploration and integration.
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    Journal: BMC Bioinformatics. 2021 Jan 06;22(1)
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  10. Free amino acids in African indigenous vegetables: Analysis with improved hydrophilic interaction ultra-high performance liquid chromatography tandem mass spectrometry and interactive machine learning.
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    Journal: J Chromatogr A. 2021 Jan 25;1637
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