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  • Databases/Tools

NAR database/Web Server and OBRC

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  1. BIGapp: A user-friendly genomic tool kit identified quantitative trait loci for creeping rootedness in alfalfa (Medicago sativa L.).
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    Journal: Plant Genome. 2025 Sep;18(3)
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  2. EDAmame: interactive exploratory data analyses with explainable models.
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    Journal: Bioinformatics. 2025 Jun 02;41(6)
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  3. ShiNyP: Unlocking SNP-Based Population Genetics-AI-Assisted Platform for Rapid and Interactive Visual Exploration.
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    Journal: Mol Biol Evol. 2025 Jun 04;42(6)
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  4. A Customizable Data Quality Tool for Global Observational Research Networks.
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    Journal: Stud Health Technol Inform. 2025 May 15;327
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  5. R/Shiny Application: Transfer Office Monitoring and Data Quality Assessment.
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    Journal: Stud Health Technol Inform. 2025 May 15;327
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  6. Machine learning based prediction by PlantCdMiner and experimental validation of cadmium-responsive genes in plants.
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    Journal: J Hazard Mater. 2025 Aug 15;494
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  7. New technology for an ancient fish: A lamprey life cycle modeling tool with an R Shiny application.
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    Journal: PLoS One. 2025;20(5)
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  8. Prediction of acute and chronic kidney diseases during the post-covid-19 pandemic with machine learning models: utilizing national electronic health records in the US.
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    Journal: EBioMedicine. 2025 May;115
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  9. Extensions of Heterogeneity in Integration and Prediction (HIP) With R Shiny Application.
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    Journal: Stat Med. 2025 Apr;44(8-9)
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  10. MetaDAVis: An R shiny application for metagenomic data analysis and visualization.
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    Journal: PLoS One. 2025;20(4)
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